PUMPKIN CREAM CHEESE SWIRL MUFFINS Recipe
If you are searching for a delightful treat that blends the rich, cozy flavors of autumn with a luscious, creamy topping, look no further than these incredible PUMPKIN CREAM CHEESE SWIRL MUFFINS. Bursting with warm spices like cinnamon, nutmeg, and cloves combined with moist pumpkin puree, plus a decadent swirl of sweet, smooth cream cheese in every bite, these muffins are an absolute showstopper. Whether you need a comforting breakfast, an afternoon pick-me-up, or a dessert that feels like a warm hug, these muffins deliver on all counts with delightful texture and flavor that will keep you coming back for more.

Ingredients You’ll Need
This recipe calls for simple, pantry-friendly ingredients that work harmoniously to create a tender, flavorful muffin with a creamy surprise inside. Each item plays a crucial role, from providing the perfect texture to adding depth to the warm pumpkin essence and that irresistible creamy swirl.
- All-purpose flour: The base that gives structure and lightness to the muffins.
- Granulated sugar: Adds sweetness and helps the muffins brown beautifully.
- Brown sugar: Brings a subtle molasses flavor that deepens the fall-inspired taste.
- Baking soda: The leavening agent that makes your muffins rise and stay fluffy.
- Salt: Balances the sweetness and enhances the flavor complexity.
- Ground cinnamon, nutmeg, cloves, and ginger: A cozy spice blend that infuses the batter with classic autumn warmth.
- Large eggs: Helps bind ingredients together and contributes to a moist crumb.
- Pumpkin puree: Delivers rich moisture and that unmistakable pumpkin flavor.
- Vegetable oil: Keeps muffins tender and moist for days.
- Milk: Adds just enough liquid to create a smooth batter without weighing it down.
- Vanilla extract: Enhances all the flavors with a sweet, fragrant note.
- Cream cheese: The star of the swirl, adding creamy tang and indulgence.
- Granulated sugar (for the swirl): Sweetens the cream cheese filling perfectly.
- Egg yolk: Adds richness and helps the cream cheese mixture set nicely.
How to Make PUMPKIN CREAM CHEESE SWIRL MUFFINS
Step 1: Preheat and Prepare
Begin by heating your oven to 375°F (190°C). This temperature ensures the muffins bake evenly and develop a golden crust. Line a 12-cup muffin tin with paper liners or spray it with non-stick cooking spray, so the muffins release easily without sticking.
Step 2: Mix Dry Ingredients
In a large bowl, whisk all the dry ingredients together: flour, granulated sugar, brown sugar, baking soda, salt, and the warm spices — cinnamon, nutmeg, cloves, and ginger. Whisking well not only distributes the leavening agent evenly but also infuses the dry base with the lovely aroma of spices, setting the tone for the entire muffin.
Step 3: Combine Wet Ingredients
In a separate bowl, whisk together the eggs, pumpkin puree, vegetable oil, milk, and vanilla extract until smooth. This mixture is the creamy, moist element that transforms the dry ingredients into a tender batter packed with autumn flavor.
Step 4: Bring It All Together
Pour the wet ingredients into the dry ingredients and gently stir just until combined. It’s important not to overmix here to keep your muffins delightfully tender with a soft crumb. A few lumps are perfectly fine!
Step 5: Prepare the Cream Cheese Swirl
In a small bowl, beat the softened cream cheese with granulated sugar, egg yolk, and vanilla extract until the mixture is smooth and creamy. This luscious swirl adds an indulgent, tangy contrast inside each muffin, elevating the taste experience.
Step 6: Assemble the Muffins
Fill each muffin cup about two-thirds full with the pumpkin batter. Then add a spoonful of the cream cheese mixture on top of the batter in each cup. Using a toothpick or skewer, gently swirl the cream cheese through the pumpkin batter — don’t overdo it to maintain pretty, distinct swirls.
Step 7: Bake to Perfection
Place the muffin tin in the oven and bake for 18 to 20 minutes. The muffins are done when a toothpick inserted into the center comes out clean or with just a few moist crumbs. Let the muffins cool in the tin for 5 minutes, then transfer them to a wire rack to cool completely. This resting time helps the muffins set perfectly while keeping them moist.
How to Serve PUMPKIN CREAM CHEESE SWIRL MUFFINS

Garnishes
Sprinkle a light dusting of powdered sugar or a pinch of cinnamon on top of these muffins to add a simple yet elegant touch. For an extra festive feel, you can drizzle a bit of maple glaze or honey, which complements the pumpkin spices beautifully.
Side Dishes
These muffins make a delightful companion to a warm cup of spiced chai, coffee, or apple cider. For brunch, pair them with a light salad or scrambled eggs to balance out the sweetness and add savory notes to your meal.
Creative Ways to Present
Serve the muffins warm with a pat of butter or a spread of pumpkin butter for an enhanced pumpkin flavor. For parties, place them in a festive basket lined with autumn-themed napkins or arrange them with fresh cranberries and mini pumpkins to create a seasonal centerpiece that’s sure to impress.
Make Ahead and Storage
Storing Leftovers
Once completely cooled, stash your leftover PUMPKIN CREAM CHEESE SWIRL MUFFINS in an airtight container at room temperature. They will stay fresh and moist for up to 3 days, perfect for quick breakfasts or snacks throughout the week.
Freezing
These muffins freeze beautifully. Wrap each muffin individually in plastic wrap or aluminum foil, then place them in a freezer-safe bag or container. Freeze for up to 2 months. When you want a quick treat, just thaw overnight in the fridge or pop them straight into the microwave for a few seconds.
Reheating
To reheat your muffins and enjoy that fresh-baked warmth, microwave them for about 20 seconds or warm them in a 350°F oven for 5-7 minutes. This refreshes the texture and melts the cream cheese swirl for the perfect cozy bite.
FAQs
Can I use canned pumpkin pie filling instead of pumpkin puree?
It’s best to stick with plain pumpkin puree because pumpkin pie filling contains added sugar and spices that could alter the balance of this recipe’s flavor and sweetness.
Can I make these muffins gluten-free?
Yes! Substitute the all-purpose flour with a 1-to-1 gluten-free baking blend. Make sure your blend contains xanthan gum for proper texture, or add it separately as per the package instructions.
How do I know when the muffins are done baking?
The classic test is inserting a toothpick into the center of a muffin—if it comes out clean or with just a few moist crumbs, they’re perfectly baked. If the toothpick is wet with batter, give them a couple more minutes in the oven.
Can I make the cream cheese swirl dairy-free?
You can try using dairy-free cream cheese alternatives, but the texture and flavor will be slightly different. Look for softened vegan cream cheese options that blend smoothly for the best results.
Can I add nuts or chocolate chips to the PUMPKIN CREAM CHEESE SWIRL MUFFINS?
Absolutely! Chopped pecans or walnuts add a wonderful crunch, and mini chocolate chips bring extra sweetness. Fold them gently into the pumpkin batter before adding the cream cheese swirl.
Final Thoughts
If you are ready to welcome the flavors of fall with open arms and a warm kitchen, these PUMPKIN CREAM CHEESE SWIRL MUFFINS are waiting for you. They are irresistibly moist, beautifully spiced, and perfectly balanced with a creamy tang that turns an ordinary muffin into something truly special. Give this recipe a try — I promise it will become one of your favorite seasonal treats to share and savor again and again.
PrintPUMPKIN CREAM CHEESE SWIRL MUFFINS Recipe
These Pumpkin Cream Cheese Swirl Muffins combine the rich flavors of pumpkin and warm spices with a luscious cream cheese swirl. Perfectly moist and subtly sweet, these muffins make a delightful breakfast treat or a cozy snack during the fall season.
- Prep Time: 20 minutes
- Cook Time: 20 minutes
- Total Time: 40 minutes
- Yield: 12 muffins 1x
- Category: Breakfast, Snack
- Method: Baking
- Cuisine: American
- Diet: Vegetarian
Ingredients
For the Muffins:
- 1 3/4 cups all-purpose flour
- 1 cup granulated sugar
- 1/2 cup brown sugar
- 1 teaspoon baking soda
- 1/2 teaspoon salt
- 2 teaspoons ground cinnamon
- 1/2 teaspoon ground nutmeg
- 1/2 teaspoon ground cloves
- 1/2 teaspoon ground ginger
- 2 large eggs
- 1 can (15 oz) pumpkin puree
- 1/2 cup vegetable oil
- 1/4 cup milk
- 1 teaspoon vanilla extract
For the Cream Cheese Swirl:
- 8 oz cream cheese, softened
- 1/4 cup granulated sugar
- 1 large egg yolk
- 1/2 teaspoon vanilla extract
Instructions
- Preheat and Prepare Pan: Preheat your oven to 375°F (190°C). Line a 12-cup muffin tin with paper liners or spray with non-stick cooking spray to prevent sticking.
- Mix Dry Ingredients: In a large bowl, whisk together the all-purpose flour, granulated sugar, brown sugar, baking soda, salt, cinnamon, nutmeg, cloves, and ginger until well combined.
- Combine Wet Ingredients: In a medium bowl, whisk the eggs, pumpkin puree, vegetable oil, milk, and vanilla extract until the mixture is smooth and homogeneous.
- Mix Batter: Add the wet ingredients to the dry ingredients and stir gently until just combined. Avoid overmixing to keep your muffins tender.
- Prepare Cream Cheese Swirl: In a small bowl, beat the softened cream cheese, granulated sugar, egg yolk, and vanilla extract together until smooth and creamy.
- Assemble Muffins: Fill each muffin cup about two-thirds full with pumpkin batter. Spoon a dollop of the cream cheese mixture on top of the batter in each cup and gently swirl it into the pumpkin batter using a toothpick or knife to create a marbled effect.
- Bake Muffins: Bake in the preheated oven for 18-20 minutes, or until a toothpick inserted into the center of a muffin comes out clean, indicating they are fully cooked.
- Cool and Serve: Let the muffins cool in the tin for 5 minutes, then transfer them to a wire rack to cool completely before serving. This prevents sogginess and improves texture.
Notes
- For a dairy-free version, substitute cream cheese and milk with plant-based alternatives.
- Ensure cream cheese is softened to facilitate easy mixing and a smooth swirl.
- Do not overmix the batter to keep muffins light and fluffy.
- Swirling gently will create an attractive marbled effect without blending the flavors too much.
- Store muffins in an airtight container at room temperature for up to 3 days or refrigerate for up to a week.
- These muffins can be frozen for up to 2 months; thaw before serving.
Nutrition
- Serving Size: 1 muffin
- Calories: 320
- Sugar: 22g
- Sodium: 230mg
- Fat: 16g
- Saturated Fat: 6g
- Unsaturated Fat: 9g
- Trans Fat: 0g
- Carbohydrates: 40g
- Fiber: 3g
- Protein: 5g
- Cholesterol: 55mg
Keywords: pumpkin muffins, cream cheese swirl, fall recipes, pumpkin spice muffins, breakfast muffins, easy baking, pumpkin puree